CDS

Accession Number TCMCG024C37876
gbkey CDS
Protein Id XP_022016275.1
Location complement(join(6153429..6153604,6155212..6155593))
Gene LOC110915838
GeneID 110915838
Organism Helianthus annuus

Protein

Length 185aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA396063
db_source XM_022160583.2
Definition mRNA decay factor CTH2 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category K
Description 3'-UTR-mediated mRNA destabilization
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K15332        [VIEW IN KEGG]
ko:K18753        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04218        [VIEW IN KEGG]
map04218        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005813        [VIEW IN EMBL-EBI]
GO:0005815        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019900        [VIEW IN EMBL-EBI]
GO:0019901        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0043186        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045495        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0060293        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTCCCCAAACGCCCCCGGTTCTCCCAACCATCACCAAACCACAAAACCGAACTATGCTCACAGTTTCAACGAGGCTCATGCGGTTACGGCGACCGTTGTTGCTTCGCTCATGACATTCAAGAGCTCAAAGGCTTCCAGAAACCGCAACAAGTGATTGCGGTTGATGAGGATAAAAAGGTGGTATCAAATTCAAACCCTAGATTGTGCTGGAGGTTTATGAACGGTGAGAAATGTCAGTATGGGGATAAATGTCATTTTATTCATGTGAGAGATGAAGGAACGAATGTGTTGCTGTGGAGGACGAAGCTGTGTAAGAGGTGGATGGAGAATGGTAGGTGTAAGTATGGCCGGAATTGTTGCTTTGCTCATGGGGAATCAGAACTGCAGAATCAAGGACTCAATGATTATGTAGAGGCTGGGCTGTTCAAAATGGCTGATAAGAACATGGAGGGGAACGGGAAACGCTTAAAAGTTAAGTGGAAAAGTAATGAGAAGATTAGCCGAGTTTATGCTGACTGGATCAATGACATGCCGCTTGTGTCTCATACGATTTAG
Protein:  
MFPKRPRFSQPSPNHKTELCSQFQRGSCGYGDRCCFAHDIQELKGFQKPQQVIAVDEDKKVVSNSNPRLCWRFMNGEKCQYGDKCHFIHVRDEGTNVLLWRTKLCKRWMENGRCKYGRNCCFAHGESELQNQGLNDYVEAGLFKMADKNMEGNGKRLKVKWKSNEKISRVYADWINDMPLVSHTI